Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBNA1BP2Q99848 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBNA1BP2Q99848 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBNA1BP2Q99848 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.65■□□□□ 0.26
EBNA1BP2Q99848 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EBNA1BP2Q99848 AC069224.1-201ENST00000566372 1715 ntBASIC16.65■□□□□ 0.26
EBNA1BP2Q99848 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 RNU1-129P-201ENST00000384064 167 ntBASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 HMGA1P7-201ENST00000406908 502 ntBASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 U1.21-201ENST00000580816 167 ntBASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 AC021097.1-201ENST00000607902 574 ntBASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
EBNA1BP2Q99848 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 CXCL1P1-201ENST00000502804 216 ntBASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 AP002469.2-201ENST00000531724 424 ntBASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 AC104692.2-201ENST00000603054 253 ntBASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 AC148477.8-201ENST00000624298 468 ntBASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 AC117500.6-201ENST00000624871 588 ntBASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
EBNA1BP2Q99848 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 PRSS29P-201ENST00000440800 595 ntBASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 MIR3909-201ENST00000579518 119 ntBASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 AL773604.1-201ENST00000617417 272 ntBASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 FAM215A-202ENST00000632077 792 ntBASIC16.62■□□□□ 0.25
EBNA1BP2Q99848 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms