Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.19■□□□□ 0.34
SMOQ99835 AL390955.2-201ENST00000603032 514 ntBASIC17.19■□□□□ 0.34
SMOQ99835 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.19■□□□□ 0.34
SMOQ99835 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.19■□□□□ 0.34
SMOQ99835 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SMOQ99835 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
SMOQ99835 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMOQ99835 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMOQ99835 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.19■□□□□ 0.34
SMOQ99835 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SMOQ99835 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.19■□□□□ 0.34
SMOQ99835 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.19■□□□□ 0.34
SMOQ99835 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SMOQ99835 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.18■□□□□ 0.34
SMOQ99835 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SMOQ99835 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.18■□□□□ 0.34
SMOQ99835 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.18■□□□□ 0.34
SMOQ99835 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.18■□□□□ 0.34
SMOQ99835 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
SMOQ99835 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.18■□□□□ 0.34
SMOQ99835 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 AC107890.1-201ENST00000422478 521 ntBASIC17.18■□□□□ 0.34
SMOQ99835 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SMOQ99835 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.18■□□□□ 0.34
SMOQ99835 AC024267.1-201ENST00000582320 895 ntBASIC17.18■□□□□ 0.34
SMOQ99835 AC005498.2-205ENST00000593218 784 ntBASIC17.18■□□□□ 0.34
SMOQ99835 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.18■□□□□ 0.34
SMOQ99835 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.18■□□□□ 0.34
SMOQ99835 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMOQ99835 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SMOQ99835 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SMOQ99835 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.17■□□□□ 0.34
SMOQ99835 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.17■□□□□ 0.34
SMOQ99835 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.17■□□□□ 0.34
SMOQ99835 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.17■□□□□ 0.34
SMOQ99835 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.17■□□□□ 0.34
SMOQ99835 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.17■□□□□ 0.34
SMOQ99835 HMGN1P19-201ENST00000436976 333 ntBASIC17.17■□□□□ 0.34
SMOQ99835 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.17■□□□□ 0.34
SMOQ99835 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SMOQ99835 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.17■□□□□ 0.34
SMOQ99835 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.17■□□□□ 0.34
SMOQ99835 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.17■□□□□ 0.34
SMOQ99835 AC140878.1-201ENST00000565277 250 ntBASIC17.17■□□□□ 0.34
SMOQ99835 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.17■□□□□ 0.34
SMOQ99835 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.17■□□□□ 0.34
SMOQ99835 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SMOQ99835 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.17■□□□□ 0.34
SMOQ99835 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMOQ99835 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SMOQ99835 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 FO538757.1-201ENST00000623083 1397 ntBASIC17.16■□□□□ 0.34
SMOQ99835 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.16■□□□□ 0.34
SMOQ99835 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SMOQ99835 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.16■□□□□ 0.34
SMOQ99835 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms