Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHOX2BQ99453 AC012317.2-201ENST00000623305 2251 ntBASIC16.66■□□□□ 0.26
PHOX2BQ99453 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.66■□□□□ 0.26
PHOX2BQ99453 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 AC123567.1-201ENST00000548294 1261 ntBASIC16.65■□□□□ 0.26
PHOX2BQ99453 C2orf69P2-201ENST00000562032 1123 ntBASIC16.65■□□□□ 0.26
PHOX2BQ99453 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 CFTRP2-201ENST00000634304 199 ntBASIC16.65■□□□□ 0.26
PHOX2BQ99453 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 AC138028.4-201ENST00000564984 1845 ntBASIC16.65■□□□□ 0.26
PHOX2BQ99453 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHOX2BQ99453 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
PHOX2BQ99453 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.64■□□□□ 0.26
PHOX2BQ99453 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PHOX2BQ99453 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.64■□□□□ 0.26
PHOX2BQ99453 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.64■□□□□ 0.26
PHOX2BQ99453 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
PHOX2BQ99453 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.64■□□□□ 0.26
PHOX2BQ99453 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 AC093010.1-201ENST00000473625 1624 ntBASIC16.64■□□□□ 0.25
PHOX2BQ99453 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 MIR4722-201ENST00000578292 60 ntBASIC16.64■□□□□ 0.25
PHOX2BQ99453 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 BTNL10-201ENST00000595971 695 ntBASIC16.64■□□□□ 0.25
PHOX2BQ99453 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHOX2BQ99453 AC134043.2-201ENST00000624206 2238 ntBASIC16.64■□□□□ 0.25
PHOX2BQ99453 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PHOX2BQ99453 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHOX2BQ99453 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHOX2BQ99453 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PHOX2BQ99453 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PHOX2BQ99453 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms