Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNX27Q96L92 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 AC092171.3-201ENST00000610122 2651 ntBASIC17.7■□□□□ 0.42
SNX27Q96L92 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX27Q96L92 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
SNX27Q96L92 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX27Q96L92 AC005622.1-201ENST00000636801 1703 ntBASIC17.69■□□□□ 0.42
SNX27Q96L92 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 AC011676.5-201ENST00000624864 2660 ntBASIC17.69■□□□□ 0.42
SNX27Q96L92 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX27Q96L92 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 ELK2AP-201ENST00000392510 1007 ntBASIC17.69■□□□□ 0.42
SNX27Q96L92 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX27Q96L92 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 BANF1P1-201ENST00000553684 263 ntBASIC17.69■□□□□ 0.42
SNX27Q96L92 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.69■□□□□ 0.42
SNX27Q96L92 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 AC061975.2-201ENST00000581722 295 ntBASIC17.69■□□□□ 0.42
SNX27Q96L92 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.69■□□□□ 0.42
SNX27Q96L92 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNX27Q96L92 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX27Q96L92 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SNX27Q96L92 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX27Q96L92 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX27Q96L92 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX27Q96L92 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNX27Q96L92 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 AC092580.3-201ENST00000430932 139 ntBASIC17.68■□□□□ 0.42
SNX27Q96L92 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX27Q96L92 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX27Q96L92 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNX27Q96L92 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
SNX27Q96L92 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX27Q96L92 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX27Q96L92 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNX27Q96L92 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNX27Q96L92 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX27Q96L92 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms