Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 AC004870.1-201ENST00000315132 882 ntBASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 RN7SL510P-201ENST00000581311 263 ntBASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHAMP1Q96JM3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 AC021087.4-201ENST00000563761 564 ntBASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 AC139887.3-201ENST00000568585 713 ntBASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHAMP1Q96JM3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 AC016027.1-202ENST00000607927 1699 ntBASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 CICP13-201ENST00000422015 2789 ntBASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 AC008608.2-201ENST00000606089 416 ntBASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHAMP1Q96JM3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHAMP1Q96JM3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.08■□□□□ 0.65
CHAMP1Q96JM3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.08■□□□□ 0.65
CHAMP1Q96JM3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHAMP1Q96JM3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms