Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
DDX11Q96FC9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX11Q96FC9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 HLA-J-202ENST00000469281 1241 ntBASIC19.56■□□□□ 0.72
DDX11Q96FC9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 AC131009.4-201ENST00000624048 1740 ntBASIC19.56■□□□□ 0.72
DDX11Q96FC9 AL512652.2-201ENST00000625156 1716 ntBASIC19.56■□□□□ 0.72
DDX11Q96FC9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX11Q96FC9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.56■□□□□ 0.72
DDX11Q96FC9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 AL139400.1-201ENST00000366220 510 ntBASIC19.55■□□□□ 0.72
DDX11Q96FC9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 AC002056.1-201ENST00000395613 760 ntBASIC19.55■□□□□ 0.72
DDX11Q96FC9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.55■□□□□ 0.72
DDX11Q96FC9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.55■□□□□ 0.72
DDX11Q96FC9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX11Q96FC9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms