Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 AL139011.1-202ENST00000642063 584 ntBASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM43Q96BQ3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 RPL13P2-201ENST00000440687 659 ntBASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 KRT8P13-201ENST00000463294 1010 ntBASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 FAM86LP-201ENST00000478302 853 ntBASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AC091271.1-201ENST00000611877 1162 ntBASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM43Q96BQ3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AC087289.5-201ENST00000586076 3175 ntBASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AL391256.1-201ENST00000443260 1855 ntBASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 ENPP7P5-201ENST00000541031 1031 ntBASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 RN7SL560P-201ENST00000577943 264 ntBASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM43Q96BQ3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms