Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFT1Q96AA3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 NUS1P2-201ENST00000417358 873 ntBASIC14.66□□□□□ -0.06
RFT1Q96AA3 IGHV3-47-201ENST00000425060 335 ntBASIC14.66□□□□□ -0.06
RFT1Q96AA3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 NUS1P1-201ENST00000446295 882 ntBASIC14.66□□□□□ -0.06
RFT1Q96AA3 HLA-J-202ENST00000469281 1241 ntBASIC14.66□□□□□ -0.06
RFT1Q96AA3 AC104819.1-201ENST00000504587 486 ntBASIC14.66□□□□□ -0.06
RFT1Q96AA3 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 AC099336.1-202ENST00000602961 463 ntBASIC14.66□□□□□ -0.06
RFT1Q96AA3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RFT1Q96AA3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFT1Q96AA3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 AC097637.2-201ENST00000624096 1997 ntBASIC14.65□□□□□ -0.06
RFT1Q96AA3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 AC013268.4-201ENST00000637413 2228 ntBASIC14.65□□□□□ -0.06
RFT1Q96AA3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 AL020989.1-201ENST00000422979 469 ntBASIC14.65□□□□□ -0.06
RFT1Q96AA3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 SIGLEC30P-201ENST00000455569 941 ntBASIC14.65□□□□□ -0.06
RFT1Q96AA3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 AC114341.1-201ENST00000618070 349 ntBASIC14.65□□□□□ -0.06
RFT1Q96AA3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms