Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 HAUS4P1-201ENST00000406739 1145 ntBASIC19.92■□□□□ 0.78
CNKSR1Q969H4 CSF2RBP1-201ENST00000447905 391 ntBASIC19.92■□□□□ 0.78
CNKSR1Q969H4 FO681548.1-201ENST00000455617 1132 ntBASIC19.92■□□□□ 0.78
CNKSR1Q969H4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 TDH-203ENST00000531764 1110 ntBASIC19.92■□□□□ 0.78
CNKSR1Q969H4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 AL365330.1-201ENST00000607459 531 ntBASIC19.92■□□□□ 0.78
CNKSR1Q969H4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 AC068587.10-201ENST00000641210 219 ntBASIC19.92■□□□□ 0.78
CNKSR1Q969H4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.92■□□□□ 0.78
CNKSR1Q969H4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AC134043.2-201ENST00000624206 2238 ntBASIC19.91■□□□□ 0.78
CNKSR1Q969H4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AC103810.3-201ENST00000583567 96 ntBASIC19.91■□□□□ 0.78
CNKSR1Q969H4 MIR4321-201ENST00000592276 80 ntBASIC19.91■□□□□ 0.78
CNKSR1Q969H4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.91■□□□□ 0.78
CNKSR1Q969H4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 FAM21FP-201ENST00000426241 1131 ntBASIC19.9■□□□□ 0.78
CNKSR1Q969H4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 LINC01115-203ENST00000606068 577 ntBASIC19.9■□□□□ 0.78
CNKSR1Q969H4 AL158212.4-201ENST00000624062 1286 ntBASIC19.9■□□□□ 0.78
CNKSR1Q969H4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNKSR1Q969H4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CNKSR1Q969H4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNKSR1Q969H4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms