Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.24■□□□□ 0.35
USP13Q92995 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.24■□□□□ 0.35
USP13Q92995 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.24■□□□□ 0.35
USP13Q92995 UGT1A2P-201ENST00000454886 866 ntBASIC17.24■□□□□ 0.35
USP13Q92995 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.24■□□□□ 0.35
USP13Q92995 AC097493.3-201ENST00000509725 367 ntBASIC17.24■□□□□ 0.35
USP13Q92995 AC069120.2-201ENST00000524091 540 ntBASIC17.24■□□□□ 0.35
USP13Q92995 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.24■□□□□ 0.35
USP13Q92995 AC073389.1-201ENST00000595595 795 ntBASIC17.24■□□□□ 0.35
USP13Q92995 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.24■□□□□ 0.35
USP13Q92995 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
USP13Q92995 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.24■□□□□ 0.35
USP13Q92995 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.24■□□□□ 0.35
USP13Q92995 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
USP13Q92995 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP13Q92995 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
USP13Q92995 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
USP13Q92995 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.23■□□□□ 0.35
USP13Q92995 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 AC006277.1-201ENST00000624348 1610 ntBASIC17.23■□□□□ 0.35
USP13Q92995 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
USP13Q92995 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.23■□□□□ 0.35
USP13Q92995 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
USP13Q92995 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
USP13Q92995 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.23■□□□□ 0.35
USP13Q92995 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
USP13Q92995 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
USP13Q92995 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.23■□□□□ 0.35
USP13Q92995 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP13Q92995 PCDH8P1-201ENST00000428983 2773 ntBASIC17.23■□□□□ 0.35
USP13Q92995 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.22■□□□□ 0.35
USP13Q92995 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
USP13Q92995 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
USP13Q92995 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
USP13Q92995 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP13Q92995 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
USP13Q92995 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.22■□□□□ 0.35
USP13Q92995 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.22■□□□□ 0.35
USP13Q92995 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
USP13Q92995 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.22■□□□□ 0.35
USP13Q92995 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 MIR661-201ENST00000384842 89 ntBASIC17.22■□□□□ 0.35
USP13Q92995 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.22■□□□□ 0.35
USP13Q92995 AC092580.3-201ENST00000430932 139 ntBASIC17.22■□□□□ 0.35
USP13Q92995 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.22■□□□□ 0.35
USP13Q92995 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.22■□□□□ 0.35
USP13Q92995 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.22■□□□□ 0.35
USP13Q92995 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.22■□□□□ 0.35
USP13Q92995 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.22■□□□□ 0.35
USP13Q92995 RARRES2P9-201ENST00000565168 469 ntBASIC17.22■□□□□ 0.35
USP13Q92995 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
USP13Q92995 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP13Q92995 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms