Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.68■□□□□ 0.42
SEMA4DQ92854 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEMA4DQ92854 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.68■□□□□ 0.42
SEMA4DQ92854 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SEMA4DQ92854 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEMA4DQ92854 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.68■□□□□ 0.42
SEMA4DQ92854 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SEMA4DQ92854 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEMA4DQ92854 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEMA4DQ92854 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 RPSAP43-201ENST00000402237 625 ntBASIC17.67■□□□□ 0.42
SEMA4DQ92854 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 BX842568.4-201ENST00000421222 227 ntBASIC17.67■□□□□ 0.42
SEMA4DQ92854 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.67■□□□□ 0.42
SEMA4DQ92854 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SEMA4DQ92854 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 ELL2P1-201ENST00000413990 1906 ntBASIC17.66■□□□□ 0.42
SEMA4DQ92854 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 AL513523.2-202ENST00000427283 2040 ntBASIC17.66■□□□□ 0.42
SEMA4DQ92854 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 GPX1P2-201ENST00000429271 606 ntBASIC17.66■□□□□ 0.42
SEMA4DQ92854 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 SPCS2P4-201ENST00000436160 681 ntBASIC17.66■□□□□ 0.42
SEMA4DQ92854 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 LINC01225-203ENST00000563550 1244 ntBASIC17.66■□□□□ 0.42
SEMA4DQ92854 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 AC005829.1-201ENST00000570002 483 ntBASIC17.66■□□□□ 0.42
SEMA4DQ92854 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 AC026120.1-201ENST00000611536 926 ntBASIC17.66■□□□□ 0.42
SEMA4DQ92854 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEMA4DQ92854 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.66■□□□□ 0.42
SEMA4DQ92854 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms