Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 HNRNPUP1-201ENST00000554987 333 ntBASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 AL008721.1-201ENST00000609964 604 ntBASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CASKIN1Q8WXD9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 AC112492.5-201ENST00000421897 457 ntBASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 AC119751.2-201ENST00000504529 210 ntBASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CASKIN1Q8WXD9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CASKIN1Q8WXD9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CASKIN1Q8WXD9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC25.14■■□□□ 1.61
CASKIN1Q8WXD9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC25.14■■□□□ 1.61
CASKIN1Q8WXD9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CASKIN1Q8WXD9 ZBTB45P2-201ENST00000452245 1531 ntBASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 AP001282.1-201ENST00000531301 1499 ntBASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CASKIN1Q8WXD9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 MIR1909-201ENST00000411312 80 ntBASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 AC136604.1-201ENST00000418535 575 ntBASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 USP32P1-208ENST00000506594 1164 ntBASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC25.12■■□□□ 1.61
CASKIN1Q8WXD9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms