Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 BX276092.5-203ENST00000456199 560 ntBASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 AL445228.2-201ENST00000605589 952 ntBASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.34■□□□□ 0.21
RFWD2Q8NHY2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 AC023157.3-201ENST00000619086 2088 ntBASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFWD2Q8NHY2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 LINC00982-205ENST00000420957 435 ntBASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 TERC-201ENST00000602385 541 ntBASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 NORAD-201ENST00000565493 5339 ntBASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD2Q8NHY2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 IER3-202ENST00000376377 1350 ntBASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD2Q8NHY2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms