Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 RBM17P3-201ENST00000417687 1192 ntBASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 AC011467.2-201ENST00000598425 242 ntBASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 AL139011.1-202ENST00000642063 584 ntBASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
DEPDC4Q8N2C3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 AC126177.1-201ENST00000547829 2218 ntBASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 AC002310.6-201ENST00000624451 1377 ntBASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 AF186996.4-201ENST00000467186 377 ntBASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 AC008608.2-201ENST00000606089 416 ntBASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DEPDC4Q8N2C3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DEPDC4Q8N2C3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DEPDC4Q8N2C3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DEPDC4Q8N2C3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DEPDC4Q8N2C3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms