Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 AL591424.1-201ENST00000442569 1213 ntBASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 MIR3909-201ENST00000579518 119 ntBASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 AL009183.1-201ENST00000603760 355 ntBASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 AL513190.1-201ENST00000621254 727 ntBASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 AC008741.2-201ENST00000612792 3115 ntBASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 MIR940-201ENST00000401276 94 ntBASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 FAM197Y3-203ENST00000618346 717 ntBASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC116Q8IYX3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms