Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 FRMD8P1-201ENST00000440433 1524 ntBASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AP000523.1-201ENST00000398242 1049 ntBASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AC009947.2-201ENST00000444014 672 ntBASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AC107918.4-201ENST00000641966 3141 ntBASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 GPR89P-201ENST00000407924 1495 ntBASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 AL157888.1-201ENST00000631930 593 ntBASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CROCCP3Q8IVE0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 AC138969.2-201ENST00000532739 9932 ntBASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 CR383656.2-201ENST00000548656 2254 ntBASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms