Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 AC025048.3-201ENST00000590609 569 ntBASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 MIR4321-201ENST00000592276 80 ntBASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 AC005702.4-201ENST00000618393 416 ntBASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS4Q8IUM7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 AC005622.1-201ENST00000636801 1703 ntBASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 AC139713.2-201ENST00000641328 2723 ntBASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 TIMM17BP1-201ENST00000545713 516 ntBASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPAS4Q8IUM7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 LINC01144-201ENST00000626198 1710 ntBASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 AC098850.1-201ENST00000419919 790 ntBASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 CYP4F24P-201ENST00000586049 1580 ntBASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 U82695.1-201ENST00000635752 1889 ntBASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms