Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 RNA5SP419-201ENST00000515908 135 ntBASIC17.17■□□□□ 0.34
RFX6Q8HWS3 SLC25A6P4-201ENST00000586535 553 ntBASIC17.17■□□□□ 0.34
RFX6Q8HWS3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 AC008894.3-201ENST00000624324 3103 ntBASIC17.16■□□□□ 0.34
RFX6Q8HWS3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 IGLL3P-201ENST00000412472 434 ntBASIC17.16■□□□□ 0.34
RFX6Q8HWS3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 AC009078.2-202ENST00000463353 338 ntBASIC17.16■□□□□ 0.34
RFX6Q8HWS3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 AL662844.1-201ENST00000546340 181 ntBASIC17.16■□□□□ 0.34
RFX6Q8HWS3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 AL031055.1-201ENST00000606362 631 ntBASIC17.16■□□□□ 0.34
RFX6Q8HWS3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 REXO1L8P-201ENST00000604378 1897 ntBASIC17.16■□□□□ 0.34
RFX6Q8HWS3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX6Q8HWS3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 RNU1-129P-201ENST00000384064 167 ntBASIC17.15■□□□□ 0.34
RFX6Q8HWS3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 TPM4P1-201ENST00000436100 807 ntBASIC17.15■□□□□ 0.34
RFX6Q8HWS3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 AL031432.2-201ENST00000566714 459 ntBASIC17.15■□□□□ 0.34
RFX6Q8HWS3 AL928711.1-201ENST00000570165 459 ntBASIC17.15■□□□□ 0.34
RFX6Q8HWS3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 U1.21-201ENST00000580816 167 ntBASIC17.15■□□□□ 0.34
RFX6Q8HWS3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RFX6Q8HWS3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.14■□□□□ 0.34
RFX6Q8HWS3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.14■□□□□ 0.34
RFX6Q8HWS3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.14■□□□□ 0.34
RFX6Q8HWS3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX6Q8HWS3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms