Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.35■□□□□ 0.85
COL23A1Q86Y22 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AC074338.1-201ENST00000416825 156 ntBASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AC134915.1-201ENST00000426461 574 ntBASIC20.34■□□□□ 0.85
COL23A1Q86Y22 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AP001258.2-201ENST00000529891 490 ntBASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AL049840.4-201ENST00000602422 811 ntBASIC20.34■□□□□ 0.85
COL23A1Q86Y22 AL022328.3-201ENST00000607943 679 ntBASIC20.34■□□□□ 0.85
COL23A1Q86Y22 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 RHOXF1P1-202ENST00000635473 501 ntBASIC20.34■□□□□ 0.85
COL23A1Q86Y22 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL23A1Q86Y22 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 AL031731.1-201ENST00000642131 2094 ntBASIC20.33■□□□□ 0.85
COL23A1Q86Y22 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 INTS4P2-202ENST00000614726 2019 ntBASIC20.33■□□□□ 0.85
COL23A1Q86Y22 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 AC012441.1-201ENST00000446669 685 ntBASIC20.33■□□□□ 0.85
COL23A1Q86Y22 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 KRT90P-201ENST00000549264 1064 ntBASIC20.33■□□□□ 0.85
COL23A1Q86Y22 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 AC016629.1-201ENST00000596579 586 ntBASIC20.33■□□□□ 0.85
COL23A1Q86Y22 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 AL365330.1-201ENST00000607459 531 ntBASIC20.33■□□□□ 0.85
COL23A1Q86Y22 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.33■□□□□ 0.85
COL23A1Q86Y22 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL23A1Q86Y22 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.33■□□□□ 0.84
COL23A1Q86Y22 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL23A1Q86Y22 AL607033.1-201ENST00000623900 1599 ntBASIC20.33■□□□□ 0.84
COL23A1Q86Y22 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.33■□□□□ 0.84
COL23A1Q86Y22 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 AC134312.5-201ENST00000568031 1313 ntBASIC20.32■□□□□ 0.84
COL23A1Q86Y22 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 SOCS2P1-201ENST00000417727 557 ntBASIC20.32■□□□□ 0.84
COL23A1Q86Y22 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 AL391256.1-201ENST00000443260 1855 ntBASIC20.32■□□□□ 0.84
COL23A1Q86Y22 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COL23A1Q86Y22 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL23A1Q86Y22 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms