Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD3Q7Z3D4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 AL662844.4-201ENST00000606367 2838 ntBASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 TIMM8BP1-201ENST00000452384 211 ntBASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 KRT8P48-201ENST00000515599 1220 ntBASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 FAM86C2P-203ENST00000528684 1004 ntBASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 AC026120.1-201ENST00000611536 926 ntBASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 ME2P1-201ENST00000426028 1970 ntBASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LYSMD3Q7Z3D4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LYSMD3Q7Z3D4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms