Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBA1AQ71U36 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.28■□□□□ 0.04
TUBA1AQ71U36 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 FAM197Y8-203ENST00000450145 560 ntBASIC15.28■□□□□ 0.04
TUBA1AQ71U36 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AP002469.2-201ENST00000531724 424 ntBASIC15.28■□□□□ 0.04
TUBA1AQ71U36 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 STK25P1-201ENST00000585406 838 ntBASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AC104692.2-201ENST00000603054 253 ntBASIC15.28■□□□□ 0.04
TUBA1AQ71U36 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 CICP14-201ENST00000629111 2732 ntBASIC15.28■□□□□ 0.04
TUBA1AQ71U36 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1AQ71U36 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 SPDYE21P-201ENST00000413323 827 ntBASIC15.27■□□□□ 0.04
TUBA1AQ71U36 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 AL160237.2-201ENST00000556165 472 ntBASIC15.27■□□□□ 0.04
TUBA1AQ71U36 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA1AQ71U36 AC148477.8-201ENST00000624298 468 ntBASIC15.27■□□□□ 0.04
TUBA1AQ71U36 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 AC079776.2-201ENST00000641154 1609 ntBASIC15.27■□□□□ 0.03
TUBA1AQ71U36 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1AQ71U36 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms