Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AL590627.1-203ENST00000421194 1026 ntBASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AL009183.1-201ENST00000603760 355 ntBASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AC005622.1-201ENST00000636801 1703 ntBASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF549Q6P9A3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 KRT19P2-202ENST00000557173 1012 ntBASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 BCAR1-209ENST00000546196 1340 ntBASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 AC024909.3-201ENST00000611513 2257 ntBASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF549Q6P9A3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.33■□□□□ 0.21
ZNF549Q6P9A3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF549Q6P9A3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.33■□□□□ 0.21
ZNF549Q6P9A3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF549Q6P9A3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF549Q6P9A3 AL365203.3-201ENST00000609742 2057 ntBASIC16.33■□□□□ 0.21
ZNF549Q6P9A3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF549Q6P9A3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AC007950.2-201ENST00000615045 2347 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms