Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 FAM220BP-201ENST00000377689 816 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 MIR943-201ENST00000401286 94 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AC125807.1-201ENST00000483097 614 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AC098859.1-201ENST00000502915 1238 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 MIR4453-201ENST00000584019 89 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 LINC02084-201ENST00000606069 1096 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AL158211.3-201ENST00000607385 239 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 MIR6080-201ENST00000617359 66 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 OR6D1P-203ENST00000641209 4860 ntBASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 AC020765.3-201ENST00000613051 740 ntBASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H3F3CQ6NXT2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 HLA-H-201ENST00000383620 1096 ntBASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 HLA-J-202ENST00000469281 1241 ntBASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 AC007967.4-201ENST00000614700 386 ntBASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 AJ011932.1-201ENST00000621707 465 ntBASIC15.21■□□□□ 0.03
H3F3CQ6NXT2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms