Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.92■□□□□ 0.3
ALFQ53S48 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.92■□□□□ 0.3
ALFQ53S48 LINC01144-201ENST00000626198 1710 ntBASIC16.92■□□□□ 0.3
ALFQ53S48 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALFQ53S48 AC099398.1-201ENST00000567919 2776 ntBASIC16.92■□□□□ 0.3
ALFQ53S48 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALFQ53S48 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALFQ53S48 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.92■□□□□ 0.3
ALFQ53S48 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.91■□□□□ 0.3
ALFQ53S48 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
ALFQ53S48 ME2P1-201ENST00000426028 1970 ntBASIC16.91■□□□□ 0.3
ALFQ53S48 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ALFQ53S48 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.91■□□□□ 0.3
ALFQ53S48 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.91■□□□□ 0.3
ALFQ53S48 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.91■□□□□ 0.3
ALFQ53S48 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.91■□□□□ 0.3
ALFQ53S48 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.91■□□□□ 0.3
ALFQ53S48 AC009093.7-201ENST00000623853 1223 ntBASIC16.91■□□□□ 0.3
ALFQ53S48 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.91■□□□□ 0.3
ALFQ53S48 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.91■□□□□ 0.3
ALFQ53S48 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ALFQ53S48 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ALFQ53S48 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
ALFQ53S48 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
ALFQ53S48 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALFQ53S48 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ALFQ53S48 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.9■□□□□ 0.3
ALFQ53S48 TSEN15P1-201ENST00000423257 515 ntBASIC16.9■□□□□ 0.3
ALFQ53S48 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.9■□□□□ 0.3
ALFQ53S48 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 AL662844.4-201ENST00000606367 2838 ntBASIC16.9■□□□□ 0.3
ALFQ53S48 KRT18P28-201ENST00000453838 1332 ntBASIC16.9■□□□□ 0.3
ALFQ53S48 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 AC005622.1-201ENST00000636801 1703 ntBASIC16.9■□□□□ 0.3
ALFQ53S48 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.9■□□□□ 0.3
ALFQ53S48 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ALFQ53S48 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.9■□□□□ 0.3
ALFQ53S48 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
ALFQ53S48 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ALFQ53S48 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ALFQ53S48 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ALFQ53S48 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.89■□□□□ 0.29
ALFQ53S48 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.89■□□□□ 0.29
ALFQ53S48 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ALFQ53S48 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms