Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB3Q15768 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.02□□□□□ -0.16
EFNB3Q15768 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB3Q15768 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
EFNB3Q15768 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB3Q15768 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNB3Q15768 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.02□□□□□ -0.16
EFNB3Q15768 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
EFNB3Q15768 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNB3Q15768 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNB3Q15768 AL353705.2-201ENST00000428243 662 ntBASIC14.02□□□□□ -0.17
EFNB3Q15768 BCRP1-201ENST00000444246 691 ntBASIC14.02□□□□□ -0.17
EFNB3Q15768 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNB3Q15768 AC093724.1-201ENST00000448659 1027 ntBASIC14.02□□□□□ -0.17
EFNB3Q15768 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.02□□□□□ -0.17
EFNB3Q15768 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNB3Q15768 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.02□□□□□ -0.17
EFNB3Q15768 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.02□□□□□ -0.17
EFNB3Q15768 MIR3197-201ENST00000582241 73 ntBASIC14.02□□□□□ -0.17
EFNB3Q15768 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNB3Q15768 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNB3Q15768 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNB3Q15768 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
EFNB3Q15768 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 GGT4P-201ENST00000623672 1708 ntBASIC14.01□□□□□ -0.17
EFNB3Q15768 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNB3Q15768 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 AL035456.1-201ENST00000456064 1369 ntBASIC14.01□□□□□ -0.17
EFNB3Q15768 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 AC105020.1-201ENST00000435356 2205 ntBASIC14.01□□□□□ -0.17
EFNB3Q15768 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNB3Q15768 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 AL603756.1-201ENST00000606511 2163 ntBASIC14.01□□□□□ -0.17
EFNB3Q15768 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 FAM8A3P-201ENST00000427218 844 ntBASIC14.01□□□□□ -0.17
EFNB3Q15768 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 AC092364.2-202ENST00000597012 1073 ntBASIC14.01□□□□□ -0.17
EFNB3Q15768 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.01□□□□□ -0.17
EFNB3Q15768 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.01□□□□□ -0.17
EFNB3Q15768 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.01□□□□□ -0.17
EFNB3Q15768 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNB3Q15768 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
EFNB3Q15768 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
EFNB3Q15768 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
EFNB3Q15768 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14□□□□□ -0.17
EFNB3Q15768 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNB3Q15768 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
EFNB3Q15768 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14□□□□□ -0.17
EFNB3Q15768 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14□□□□□ -0.17
EFNB3Q15768 GOLGA2P9-201ENST00000596977 1937 ntBASIC14□□□□□ -0.17
EFNB3Q15768 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EFNB3Q15768 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNB3Q15768 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNB3Q15768 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14□□□□□ -0.17
EFNB3Q15768 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14□□□□□ -0.17
EFNB3Q15768 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14□□□□□ -0.17
EFNB3Q15768 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14□□□□□ -0.17
EFNB3Q15768 AC093214.1-201ENST00000511688 1107 ntBASIC14□□□□□ -0.17
EFNB3Q15768 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14□□□□□ -0.17
EFNB3Q15768 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14□□□□□ -0.17
EFNB3Q15768 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14□□□□□ -0.17
EFNB3Q15768 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14□□□□□ -0.17
EFNB3Q15768 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14□□□□□ -0.17
EFNB3Q15768 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14□□□□□ -0.17
EFNB3Q15768 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
EFNB3Q15768 AC003101.2-201ENST00000612557 442 ntBASIC14□□□□□ -0.17
EFNB3Q15768 AJ011932.1-201ENST00000621707 465 ntBASIC14□□□□□ -0.17
EFNB3Q15768 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14□□□□□ -0.17
EFNB3Q15768 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14□□□□□ -0.17
EFNB3Q15768 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms