Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.33□□□□□ -0.28
CX3CL1P78423 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.33□□□□□ -0.28
CX3CL1P78423 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.33□□□□□ -0.28
CX3CL1P78423 AC087641.1-201ENST00000557561 1021 ntBASIC13.33□□□□□ -0.28
CX3CL1P78423 AC034105.1-201ENST00000563488 319 ntBASIC13.33□□□□□ -0.28
CX3CL1P78423 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.33□□□□□ -0.28
CX3CL1P78423 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CX3CL1P78423 ACTL9-202ENST00000612068 1252 ntBASIC13.33□□□□□ -0.28
CX3CL1P78423 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.33□□□□□ -0.28
CX3CL1P78423 AL139011.1-202ENST00000642063 584 ntBASIC13.33□□□□□ -0.28
CX3CL1P78423 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CX3CL1P78423 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.33□□□□□ -0.28
CX3CL1P78423 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CX3CL1P78423 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.33□□□□□ -0.28
CX3CL1P78423 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CX3CL1P78423 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CX3CL1P78423 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.32□□□□□ -0.28
CX3CL1P78423 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CX3CL1P78423 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CX3CL1P78423 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 IGLL3P-201ENST00000412472 434 ntBASIC13.32□□□□□ -0.28
CX3CL1P78423 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CX3CL1P78423 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.32□□□□□ -0.28
CX3CL1P78423 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.32□□□□□ -0.28
CX3CL1P78423 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.32□□□□□ -0.28
CX3CL1P78423 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CL1P78423 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.32□□□□□ -0.28
CX3CL1P78423 CYP2A7P1-201ENST00000595391 815 ntBASIC13.32□□□□□ -0.28
CX3CL1P78423 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CL1P78423 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
CX3CL1P78423 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 AC092171.3-201ENST00000610122 2651 ntBASIC13.32□□□□□ -0.28
CX3CL1P78423 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 AC006538.1-201ENST00000567905 1585 ntBASIC13.32□□□□□ -0.28
CX3CL1P78423 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CX3CL1P78423 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CL1P78423 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CL1P78423 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CL1P78423 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CL1P78423 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CL1P78423 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CL1P78423 AC012569.1-201ENST00000591191 1524 ntBASIC13.31□□□□□ -0.28
CX3CL1P78423 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
CX3CL1P78423 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CL1P78423 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 AL513480.1-201ENST00000451731 511 ntBASIC13.31□□□□□ -0.28
CX3CL1P78423 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 SLC25A1P1-201ENST00000528351 927 ntBASIC13.31□□□□□ -0.28
CX3CL1P78423 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.31□□□□□ -0.28
CX3CL1P78423 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CL1P78423 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CL1P78423 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.31□□□□□ -0.28
CX3CL1P78423 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.31□□□□□ -0.28
CX3CL1P78423 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CL1P78423 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms