Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.88□□□□□ -0.03
RPS4XP62701 AC021097.1-201ENST00000607902 574 ntBASIC14.88□□□□□ -0.03
RPS4XP62701 AL645728.2-201ENST00000641974 660 ntBASIC14.88□□□□□ -0.03
RPS4XP62701 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.88□□□□□ -0.03
RPS4XP62701 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RPS4XP62701 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RPS4XP62701 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPS4XP62701 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.88□□□□□ -0.03
RPS4XP62701 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
RPS4XP62701 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPS4XP62701 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.87□□□□□ -0.03
RPS4XP62701 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPS4XP62701 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPS4XP62701 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.87□□□□□ -0.03
RPS4XP62701 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.87□□□□□ -0.03
RPS4XP62701 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RPS4XP62701 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 AP006288.1-201ENST00000446065 395 ntBASIC14.87□□□□□ -0.03
RPS4XP62701 KRT18P2-201ENST00000447938 1258 ntBASIC14.87□□□□□ -0.03
RPS4XP62701 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.87□□□□□ -0.03
RPS4XP62701 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.87□□□□□ -0.03
RPS4XP62701 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
RPS4XP62701 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 AL031055.1-201ENST00000606362 631 ntBASIC14.87□□□□□ -0.03
RPS4XP62701 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.87□□□□□ -0.03
RPS4XP62701 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.87□□□□□ -0.03
RPS4XP62701 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPS4XP62701 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.87□□□□□ -0.03
RPS4XP62701 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RPS4XP62701 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPS4XP62701 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RPS4XP62701 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.86□□□□□ -0.03
RPS4XP62701 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RPS4XP62701 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.86□□□□□ -0.03
RPS4XP62701 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RPS4XP62701 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RPS4XP62701 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RPS4XP62701 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 PMS2P4-201ENST00000412466 1052 ntBASIC14.86□□□□□ -0.03
RPS4XP62701 IGLL3P-201ENST00000412472 434 ntBASIC14.86□□□□□ -0.03
RPS4XP62701 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.86□□□□□ -0.03
RPS4XP62701 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RPS4XP62701 SNHG9-202ENST00000564014 471 ntBASIC14.86□□□□□ -0.03
RPS4XP62701 AL031432.2-201ENST00000566714 459 ntBASIC14.86□□□□□ -0.03
RPS4XP62701 AL928711.1-201ENST00000570165 459 ntBASIC14.86□□□□□ -0.03
RPS4XP62701 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.86□□□□□ -0.03
RPS4XP62701 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RPS4XP62701 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPS4XP62701 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.86□□□□□ -0.03
RPS4XP62701 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.85□□□□□ -0.03
RPS4XP62701 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPS4XP62701 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPS4XP62701 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
RPS4XP62701 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPS4XP62701 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.85□□□□□ -0.03
RPS4XP62701 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms