Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
CDC42P60953 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.12■□□□□ 0.01
CDC42P60953 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 AC005521.1-201ENST00000393351 872 ntBASIC15.12■□□□□ 0.01
CDC42P60953 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 AC211429.1-201ENST00000415277 523 ntBASIC15.12■□□□□ 0.01
CDC42P60953 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.12■□□□□ 0.01
CDC42P60953 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CDC42P60953 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.12■□□□□ 0.01
CDC42P60953 AP000867.4-201ENST00000641616 219 ntBASIC15.12■□□□□ 0.01
CDC42P60953 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDC42P60953 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDC42P60953 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC42P60953 AL590787.1-201ENST00000568856 1315 ntBASIC15.12■□□□□ 0.01
CDC42P60953 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDC42P60953 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42P60953 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC42P60953 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.11■□□□□ 0.01
CDC42P60953 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 GPAA1P2-202ENST00000606848 1787 ntBASIC15.11■□□□□ 0.01
CDC42P60953 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CDC42P60953 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.11■□□□□ 0.01
CDC42P60953 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 MINOS1P3-201ENST00000457048 203 ntBASIC15.11■□□□□ 0.01
CDC42P60953 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.11■□□□□ 0.01
CDC42P60953 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CDC42P60953 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 AC006011.2-201ENST00000621313 1158 ntBASIC15.11■□□□□ 0.01
CDC42P60953 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC42P60953 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42P60953 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42P60953 AC013268.4-201ENST00000637413 2228 ntBASIC15.11■□□□□ 0.01
CDC42P60953 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDC42P60953 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42P60953 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms