Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.28■□□□□ 0.68
RHBDL3P58872 FLJ38576-201ENST00000623820 2459 ntBASIC19.28■□□□□ 0.68
RHBDL3P58872 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RHBDL3P58872 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RHBDL3P58872 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 AC005052.1-201ENST00000625181 2492 ntBASIC19.27■□□□□ 0.68
RHBDL3P58872 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.27■□□□□ 0.68
RHBDL3P58872 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RHBDL3P58872 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 DGCR5-201ENST00000399539 862 ntBASIC19.27■□□□□ 0.68
RHBDL3P58872 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
RHBDL3P58872 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.27■□□□□ 0.68
RHBDL3P58872 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.27■□□□□ 0.68
RHBDL3P58872 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 AC025048.3-201ENST00000590609 569 ntBASIC19.27■□□□□ 0.68
RHBDL3P58872 AC005702.4-201ENST00000618393 416 ntBASIC19.27■□□□□ 0.68
RHBDL3P58872 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHBDL3P58872 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.27■□□□□ 0.68
RHBDL3P58872 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RHBDL3P58872 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RHBDL3P58872 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.27■□□□□ 0.67
RHBDL3P58872 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RHBDL3P58872 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RHBDL3P58872 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RHBDL3P58872 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
RHBDL3P58872 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.26■□□□□ 0.67
RHBDL3P58872 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
RHBDL3P58872 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RHBDL3P58872 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RHBDL3P58872 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.26■□□□□ 0.67
RHBDL3P58872 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.26■□□□□ 0.67
RHBDL3P58872 AC093004.1-201ENST00000508850 424 ntBASIC19.26■□□□□ 0.67
RHBDL3P58872 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.26■□□□□ 0.67
RHBDL3P58872 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.26■□□□□ 0.67
RHBDL3P58872 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
RHBDL3P58872 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.26■□□□□ 0.67
RHBDL3P58872 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RHBDL3P58872 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHBDL3P58872 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.25■□□□□ 0.67
RHBDL3P58872 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 SLC7A15P-201ENST00000424028 1363 ntBASIC19.25■□□□□ 0.67
RHBDL3P58872 AL391825.1-201ENST00000457671 1364 ntBASIC19.25■□□□□ 0.67
RHBDL3P58872 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 FO393414.2-201ENST00000405153 598 ntBASIC19.25■□□□□ 0.67
RHBDL3P58872 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.25■□□□□ 0.67
RHBDL3P58872 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.25■□□□□ 0.67
RHBDL3P58872 MEIS3P1-201ENST00000495167 958 ntBASIC19.25■□□□□ 0.67
RHBDL3P58872 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.25■□□□□ 0.67
RHBDL3P58872 WASH4P-201ENST00000564273 1246 ntBASIC19.25■□□□□ 0.67
RHBDL3P58872 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.25■□□□□ 0.67
RHBDL3P58872 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHBDL3P58872 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RHBDL3P58872 AGGF1P2-201ENST00000426656 2106 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms