Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RIPK4P57078 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.48■■□□□ 1.03
RIPK4P57078 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.48■■□□□ 1.03
RIPK4P57078 AL662844.4-201ENST00000606367 2838 ntBASIC21.47■■□□□ 1.03
RIPK4P57078 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RIPK4P57078 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RIPK4P57078 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.47■■□□□ 1.03
RIPK4P57078 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.47■■□□□ 1.03
RIPK4P57078 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.47■■□□□ 1.03
RIPK4P57078 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RIPK4P57078 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.47■■□□□ 1.03
RIPK4P57078 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.47■■□□□ 1.03
RIPK4P57078 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
RIPK4P57078 RNA5SP410-201ENST00000516285 106 ntBASIC21.47■■□□□ 1.03
RIPK4P57078 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.47■■□□□ 1.03
RIPK4P57078 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.47■■□□□ 1.03
RIPK4P57078 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.47■■□□□ 1.03
RIPK4P57078 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
RIPK4P57078 MIR6080-201ENST00000617359 66 ntBASIC21.47■■□□□ 1.03
RIPK4P57078 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 TUBB3P1-201ENST00000405796 1332 ntBASIC21.47■■□□□ 1.03
RIPK4P57078 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 U82695.1-201ENST00000635752 1889 ntBASIC21.47■■□□□ 1.03
RIPK4P57078 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
RIPK4P57078 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RIPK4P57078 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RIPK4P57078 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 AC084018.2-201ENST00000613093 2607 ntBASIC21.46■■□□□ 1.03
RIPK4P57078 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RIPK4P57078 REXO1L8P-201ENST00000604378 1897 ntBASIC21.46■■□□□ 1.03
RIPK4P57078 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RIPK4P57078 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.46■■□□□ 1.03
RIPK4P57078 SPDYE7P-202ENST00000420373 878 ntBASIC21.46■■□□□ 1.03
RIPK4P57078 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.46■■□□□ 1.03
RIPK4P57078 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.46■■□□□ 1.03
RIPK4P57078 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.46■■□□□ 1.03
RIPK4P57078 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 AC092364.2-201ENST00000596710 2692 ntBASIC21.46■■□□□ 1.03
RIPK4P57078 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RIPK4P57078 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.46■■□□□ 1.03
RIPK4P57078 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.46■■□□□ 1.03
RIPK4P57078 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RIPK4P57078 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK4P57078 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK4P57078 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK4P57078 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RIPK4P57078 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RIPK4P57078 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RIPK4P57078 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.45■■□□□ 1.02
RIPK4P57078 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.45■■□□□ 1.02
RIPK4P57078 CYMP-203ENST00000474680 1263 ntBASIC21.45■■□□□ 1.02
RIPK4P57078 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
RIPK4P57078 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.45■■□□□ 1.02
RIPK4P57078 AC051619.7-201ENST00000568314 623 ntBASIC21.45■■□□□ 1.02
RIPK4P57078 AC061975.2-201ENST00000581722 295 ntBASIC21.45■■□□□ 1.02
RIPK4P57078 AC003101.2-201ENST00000612557 442 ntBASIC21.45■■□□□ 1.02
RIPK4P57078 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
RIPK4P57078 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
RIPK4P57078 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.45■■□□□ 1.02
RIPK4P57078 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.45■■□□□ 1.02
RIPK4P57078 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms