Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN20P56880 MIR1233-2-201ENST00000408138 82 ntBASIC15.14■□□□□ 0.01
CLDN20P56880 MIR1233-1-201ENST00000408722 82 ntBASIC15.14■□□□□ 0.01
CLDN20P56880 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN20P56880 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 AC068137.2-201ENST00000605408 478 ntBASIC15.14■□□□□ 0.01
CLDN20P56880 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN20P56880 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN20P56880 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN20P56880 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN20P56880 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN20P56880 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CLDN20P56880 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN20P56880 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN20P56880 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN20P56880 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN20P56880 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN20P56880 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN20P56880 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN20P56880 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN20P56880 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN20P56880 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN20P56880 C20orf181-201ENST00000623918 480 ntBASIC15.13■□□□□ 0.01
CLDN20P56880 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN20P56880 AL662844.4-201ENST00000606367 2838 ntBASIC15.13■□□□□ 0.01
CLDN20P56880 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 AL365203.3-201ENST00000609742 2057 ntBASIC15.13■□□□□ 0.01
CLDN20P56880 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN20P56880 AC099063.4-201ENST00000641099 1602 ntBASIC15.13■□□□□ 0.01
CLDN20P56880 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CLDN20P56880 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN20P56880 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN20P56880 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN20P56880 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 AC092384.3-202ENST00000564646 2873 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLDN20P56880 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN20P56880 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN20P56880 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN20P56880 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN20P56880 HCG4-201ENST00000418983 998 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.12■□□□□ 0.01
CLDN20P56880 FAM58CP-201ENST00000435741 640 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN20P56880 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLDN20P56880 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN20P56880 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN20P56880 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.12■□□□□ 0.01
CLDN20P56880 AC087641.1-201ENST00000557561 1021 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 AC005829.1-201ENST00000570002 483 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 AP002472.1-201ENST00000577490 586 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
CLDN20P56880 MIR4492-201ENST00000581627 80 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 AC006538.3-201ENST00000612495 578 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 AC091812.2-201ENST00000619081 385 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 AC139530.3-201ENST00000620344 690 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 AC055717.3-201ENST00000622967 595 ntBASIC15.12■□□□□ 0.01
CLDN20P56880 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms