Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN8P56748 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN8P56748 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CLDN8P56748 U82695.1-201ENST00000635752 1889 ntBASIC15.67■□□□□ 0.1
CLDN8P56748 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.67■□□□□ 0.1
CLDN8P56748 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CLDN8P56748 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CLDN8P56748 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CLDN8P56748 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CLDN8P56748 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.67■□□□□ 0.1
CLDN8P56748 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 PRSS29P-201ENST00000440800 595 ntBASIC15.67■□□□□ 0.1
CLDN8P56748 CXCL1P1-201ENST00000502804 216 ntBASIC15.67■□□□□ 0.1
CLDN8P56748 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN8P56748 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CLDN8P56748 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.67■□□□□ 0.1
CLDN8P56748 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN8P56748 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CLDN8P56748 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN8P56748 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN8P56748 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN8P56748 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN8P56748 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN8P56748 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN8P56748 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN8P56748 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN8P56748 PMS2P4-201ENST00000412466 1052 ntBASIC15.66■□□□□ 0.1
CLDN8P56748 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN8P56748 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CLDN8P56748 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLDN8P56748 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN8P56748 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN8P56748 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.66■□□□□ 0.1
CLDN8P56748 AL031055.1-201ENST00000606362 631 ntBASIC15.66■□□□□ 0.1
CLDN8P56748 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN8P56748 AL645728.2-201ENST00000641974 660 ntBASIC15.66■□□□□ 0.1
CLDN8P56748 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLDN8P56748 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN8P56748 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN8P56748 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN8P56748 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN8P56748 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN8P56748 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN8P56748 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN8P56748 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN8P56748 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN8P56748 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN8P56748 KRT18P56-201ENST00000507275 550 ntBASIC15.65■□□□□ 0.1
CLDN8P56748 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms