Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
BRPF1P55201 AC079140.1-201ENST00000508039 487 ntBASIC20.93■□□□□ 0.94
BRPF1P55201 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 AC004449.1-201ENST00000564240 433 ntBASIC20.93■□□□□ 0.94
BRPF1P55201 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.93■□□□□ 0.94
BRPF1P55201 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.93■□□□□ 0.94
BRPF1P55201 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.93■□□□□ 0.94
BRPF1P55201 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.93■□□□□ 0.94
BRPF1P55201 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.93■□□□□ 0.94
BRPF1P55201 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BRPF1P55201 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRPF1P55201 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.92■□□□□ 0.94
BRPF1P55201 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.92■□□□□ 0.94
BRPF1P55201 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.92■□□□□ 0.94
BRPF1P55201 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.92■□□□□ 0.94
BRPF1P55201 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.92■□□□□ 0.94
BRPF1P55201 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
BRPF1P55201 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
BRPF1P55201 AC015922.1-201ENST00000421102 1152 ntBASIC20.92■□□□□ 0.94
BRPF1P55201 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.92■□□□□ 0.94
BRPF1P55201 AC098859.1-201ENST00000502915 1238 ntBASIC20.92■□□□□ 0.94
BRPF1P55201 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.92■□□□□ 0.94
BRPF1P55201 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BRPF1P55201 AC027307.2-201ENST00000591252 911 ntBASIC20.92■□□□□ 0.94
BRPF1P55201 AC005498.2-205ENST00000593218 784 ntBASIC20.92■□□□□ 0.94
BRPF1P55201 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
BRPF1P55201 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
BRPF1P55201 Z92544.3-201ENST00000624747 417 ntBASIC20.92■□□□□ 0.94
BRPF1P55201 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.92■□□□□ 0.94
BRPF1P55201 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.92■□□□□ 0.94
BRPF1P55201 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.92■□□□□ 0.94
BRPF1P55201 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.92■□□□□ 0.94
BRPF1P55201 AL513523.2-202ENST00000427283 2040 ntBASIC20.92■□□□□ 0.94
BRPF1P55201 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.92■□□□□ 0.94
BRPF1P55201 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRPF1P55201 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRPF1P55201 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRPF1P55201 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRPF1P55201 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.91■□□□□ 0.94
BRPF1P55201 AC245100.5-201ENST00000452108 331 ntBASIC20.91■□□□□ 0.94
BRPF1P55201 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRPF1P55201 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 AP000842.3-202ENST00000569238 1080 ntBASIC20.91■□□□□ 0.94
BRPF1P55201 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.91■□□□□ 0.94
BRPF1P55201 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.91■□□□□ 0.94
BRPF1P55201 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.91■□□□□ 0.94
BRPF1P55201 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.91■□□□□ 0.94
BRPF1P55201 AL365330.1-201ENST00000607459 531 ntBASIC20.91■□□□□ 0.94
BRPF1P55201 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
BRPF1P55201 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
BRPF1P55201 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRPF1P55201 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
BRPF1P55201 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
BRPF1P55201 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.9■□□□□ 0.94
BRPF1P55201 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BRPF1P55201 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.9■□□□□ 0.94
BRPF1P55201 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.9■□□□□ 0.94
BRPF1P55201 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
BRPF1P55201 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
BRPF1P55201 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BRPF1P55201 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BRPF1P55201 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
BRPF1P55201 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.9■□□□□ 0.94
BRPF1P55201 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.9■□□□□ 0.94
BRPF1P55201 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.9■□□□□ 0.94
BRPF1P55201 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.9■□□□□ 0.94
BRPF1P55201 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.9■□□□□ 0.94
BRPF1P55201 AC022145.2-201ENST00000598203 171 ntBASIC20.9■□□□□ 0.94
BRPF1P55201 AC012645.4-201ENST00000610691 1061 ntBASIC20.9■□□□□ 0.94
BRPF1P55201 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.9■□□□□ 0.94
BRPF1P55201 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRPF1P55201 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.9■□□□□ 0.94
BRPF1P55201 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms