Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.1■□□□□ 0.49
CDK7P50613 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK7P50613 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK7P50613 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.1■□□□□ 0.49
CDK7P50613 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.1■□□□□ 0.49
CDK7P50613 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.1■□□□□ 0.49
CDK7P50613 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK7P50613 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK7P50613 AC084018.2-201ENST00000613093 2607 ntBASIC18.1■□□□□ 0.49
CDK7P50613 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK7P50613 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK7P50613 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDK7P50613 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK7P50613 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK7P50613 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDK7P50613 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.09■□□□□ 0.49
CDK7P50613 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDK7P50613 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.09■□□□□ 0.49
CDK7P50613 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.09■□□□□ 0.49
CDK7P50613 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.09■□□□□ 0.49
CDK7P50613 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.09■□□□□ 0.49
CDK7P50613 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDK7P50613 AC098850.1-201ENST00000419919 790 ntBASIC18.09■□□□□ 0.49
CDK7P50613 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.09■□□□□ 0.49
CDK7P50613 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDK7P50613 AL589987.1-201ENST00000453380 819 ntBASIC18.09■□□□□ 0.49
CDK7P50613 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.09■□□□□ 0.49
CDK7P50613 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.09■□□□□ 0.49
CDK7P50613 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.09■□□□□ 0.49
CDK7P50613 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDK7P50613 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDK7P50613 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.09■□□□□ 0.49
CDK7P50613 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.09■□□□□ 0.49
CDK7P50613 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.09■□□□□ 0.49
CDK7P50613 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.09■□□□□ 0.49
CDK7P50613 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDK7P50613 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDK7P50613 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK7P50613 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK7P50613 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CDK7P50613 AL589702.1-201ENST00000641229 1509 ntBASIC18.08■□□□□ 0.49
CDK7P50613 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK7P50613 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.08■□□□□ 0.49
CDK7P50613 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.08■□□□□ 0.49
CDK7P50613 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.08■□□□□ 0.49
CDK7P50613 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK7P50613 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDK7P50613 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
CDK7P50613 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDK7P50613 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK7P50613 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.08■□□□□ 0.48
CDK7P50613 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK7P50613 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.08■□□□□ 0.48
CDK7P50613 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDK7P50613 AC092658.1-201ENST00000505836 891 ntBASIC18.08■□□□□ 0.48
CDK7P50613 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.08■□□□□ 0.48
CDK7P50613 AC123567.1-201ENST00000548294 1261 ntBASIC18.08■□□□□ 0.48
CDK7P50613 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CDK7P50613 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK7P50613 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.08■□□□□ 0.48
CDK7P50613 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.08■□□□□ 0.48
CDK7P50613 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CDK7P50613 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK7P50613 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK7P50613 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK7P50613 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.07■□□□□ 0.48
CDK7P50613 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDK7P50613 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDK7P50613 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms