Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC073648.2-201ENST00000510116 352 ntBASIC19.27■□□□□ 0.68
MRE11P49959 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.27■□□□□ 0.68
MRE11P49959 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.27■□□□□ 0.68
MRE11P49959 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.27■□□□□ 0.68
MRE11P49959 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.27■□□□□ 0.68
MRE11P49959 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MRE11P49959 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.27■□□□□ 0.68
MRE11P49959 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRE11P49959 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRE11P49959 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRE11P49959 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MRE11P49959 GPR89P-201ENST00000407924 1495 ntBASIC19.27■□□□□ 0.67
MRE11P49959 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MRE11P49959 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.27■□□□□ 0.67
MRE11P49959 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MRE11P49959 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MRE11P49959 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MRE11P49959 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.27■□□□□ 0.67
MRE11P49959 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
MRE11P49959 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.27■□□□□ 0.67
MRE11P49959 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.27■□□□□ 0.67
MRE11P49959 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 AC006486.2-201ENST00000624246 2199 ntBASIC19.26■□□□□ 0.67
MRE11P49959 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 AC006449.6-201ENST00000612330 2296 ntBASIC19.26■□□□□ 0.67
MRE11P49959 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MRE11P49959 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.26■□□□□ 0.67
MRE11P49959 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.26■□□□□ 0.67
MRE11P49959 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 RNA5SP419-201ENST00000515908 135 ntBASIC19.26■□□□□ 0.67
MRE11P49959 AP003041.3-201ENST00000527151 707 ntBASIC19.26■□□□□ 0.67
MRE11P49959 NEK4P2-201ENST00000580004 1012 ntBASIC19.26■□□□□ 0.67
MRE11P49959 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.26■□□□□ 0.67
MRE11P49959 AL353801.3-201ENST00000609898 542 ntBASIC19.26■□□□□ 0.67
MRE11P49959 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MRE11P49959 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.26■□□□□ 0.67
MRE11P49959 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.26■□□□□ 0.67
MRE11P49959 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRE11P49959 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.25■□□□□ 0.67
MRE11P49959 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 AC002310.6-201ENST00000624451 1377 ntBASIC19.25■□□□□ 0.67
MRE11P49959 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 CHCHD2P8-201ENST00000429873 447 ntBASIC19.25■□□□□ 0.67
MRE11P49959 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.25■□□□□ 0.67
MRE11P49959 SEC1P-202ENST00000473944 940 ntBASIC19.25■□□□□ 0.67
MRE11P49959 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.25■□□□□ 0.67
MRE11P49959 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MRE11P49959 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 POLL-206ENST00000370172 2308 ntTSL 2 BASIC19.25■□□□□ 0.67
MRE11P49959 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MRE11P49959 AC104581.4-201ENST00000623126 3052 ntBASIC19.25■□□□□ 0.67
MRE11P49959 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MRE11P49959 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms