Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.75■□□□□ 0.11
PRIM2P49643 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRIM2P49643 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.75■□□□□ 0.11
PRIM2P49643 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
PRIM2P49643 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.74■□□□□ 0.11
PRIM2P49643 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
PRIM2P49643 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.74■□□□□ 0.11
PRIM2P49643 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.74■□□□□ 0.11
PRIM2P49643 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PRIM2P49643 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.74■□□□□ 0.11
PRIM2P49643 AC073621.1-201ENST00000392730 636 ntBASIC15.74■□□□□ 0.11
PRIM2P49643 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 AL031008.1-201ENST00000619963 541 ntBASIC15.74■□□□□ 0.11
PRIM2P49643 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.74■□□□□ 0.11
PRIM2P49643 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.74■□□□□ 0.11
PRIM2P49643 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
PRIM2P49643 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.74■□□□□ 0.11
PRIM2P49643 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRIM2P49643 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRIM2P49643 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.73■□□□□ 0.11
PRIM2P49643 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.73■□□□□ 0.11
PRIM2P49643 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.73■□□□□ 0.11
PRIM2P49643 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.73■□□□□ 0.11
PRIM2P49643 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 AC091167.2-201ENST00000579581 588 ntBASIC15.73■□□□□ 0.11
PRIM2P49643 AL356488.2-201ENST00000602755 427 ntBASIC15.73■□□□□ 0.11
PRIM2P49643 AC008667.4-201ENST00000607370 168 ntBASIC15.73■□□□□ 0.11
PRIM2P49643 REXO1L3P-201ENST00000622202 1288 ntBASIC15.73■□□□□ 0.11
PRIM2P49643 AC005593.1-201ENST00000624894 515 ntBASIC15.73■□□□□ 0.11
PRIM2P49643 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRIM2P49643 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.73■□□□□ 0.11
PRIM2P49643 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.73■□□□□ 0.11
PRIM2P49643 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms