Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 GGT3P-204ENST00000453783 1664 ntBASIC20.65■□□□□ 0.9
COL15A1P39059 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
COL15A1P39059 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.65■□□□□ 0.9
COL15A1P39059 AC119751.2-201ENST00000504529 210 ntBASIC20.65■□□□□ 0.9
COL15A1P39059 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
COL15A1P39059 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL15A1P39059 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.64■□□□□ 0.9
COL15A1P39059 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.9
COL15A1P39059 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.64■□□□□ 0.9
COL15A1P39059 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL15A1P39059 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL15A1P39059 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.64■□□□□ 0.9
COL15A1P39059 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL15A1P39059 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL15A1P39059 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.64■□□□□ 0.89
COL15A1P39059 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 AL139010.1-201ENST00000454878 894 ntBASIC20.64■□□□□ 0.89
COL15A1P39059 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
COL15A1P39059 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
COL15A1P39059 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COL15A1P39059 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COL15A1P39059 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.64■□□□□ 0.89
COL15A1P39059 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL15A1P39059 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.64■□□□□ 0.89
COL15A1P39059 LTB4R2-202ENST00000528054 3092 ntBASIC20.64■□□□□ 0.89
COL15A1P39059 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL15A1P39059 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL15A1P39059 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.63■□□□□ 0.89
COL15A1P39059 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.63■□□□□ 0.89
COL15A1P39059 WFDC1-204ENST00000613603 549 ntBASIC20.63■□□□□ 0.89
COL15A1P39059 MIR6799-201ENST00000620297 69 ntBASIC20.63■□□□□ 0.89
COL15A1P39059 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COL15A1P39059 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL15A1P39059 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.63■□□□□ 0.89
COL15A1P39059 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL15A1P39059 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.62■□□□□ 0.89
COL15A1P39059 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
COL15A1P39059 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.62■□□□□ 0.89
COL15A1P39059 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.62■□□□□ 0.89
COL15A1P39059 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.62■□□□□ 0.89
COL15A1P39059 AC025048.3-201ENST00000590609 569 ntBASIC20.62■□□□□ 0.89
COL15A1P39059 AL512343.1-201ENST00000605837 169 ntBASIC20.62■□□□□ 0.89
COL15A1P39059 AC074044.1-201ENST00000609673 707 ntBASIC20.62■□□□□ 0.89
COL15A1P39059 AC005702.4-201ENST00000618393 416 ntBASIC20.62■□□□□ 0.89
COL15A1P39059 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL15A1P39059 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.62■□□□□ 0.89
COL15A1P39059 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
COL15A1P39059 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms