Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ATP6V1AP38606 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V1AP38606 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V1AP38606 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP6V1AP38606 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 BOLA2P3-201ENST00000404566 256 ntBASIC20.77■□□□□ 0.92
ATP6V1AP38606 FO393414.2-201ENST00000405153 598 ntBASIC20.77■□□□□ 0.92
ATP6V1AP38606 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.77■□□□□ 0.92
ATP6V1AP38606 MIR4538-201ENST00000581377 78 ntBASIC20.77■□□□□ 0.92
ATP6V1AP38606 RPSAP52-203ENST00000622976 1023 ntBASIC20.77■□□□□ 0.92
ATP6V1AP38606 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V1AP38606 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.77■□□□□ 0.91
ATP6V1AP38606 PP12613-201ENST00000424958 2230 ntBASIC20.77■□□□□ 0.91
ATP6V1AP38606 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATP6V1AP38606 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
ATP6V1AP38606 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATP6V1AP38606 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP6V1AP38606 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
ATP6V1AP38606 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 USP32P1-208ENST00000506594 1164 ntBASIC20.76■□□□□ 0.91
ATP6V1AP38606 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V1AP38606 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 CYP4F24P-201ENST00000586049 1580 ntBASIC20.76■□□□□ 0.91
ATP6V1AP38606 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V1AP38606 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V1AP38606 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V1AP38606 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V1AP38606 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 FAM8A2P-201ENST00000528813 1142 ntBASIC20.75■□□□□ 0.91
ATP6V1AP38606 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V1AP38606 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V1AP38606 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V1AP38606 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP6V1AP38606 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 AC018665.1-201ENST00000622927 1362 ntBASIC20.74■□□□□ 0.91
ATP6V1AP38606 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V1AP38606 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP6V1AP38606 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms