Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.63□□□□□ -0.23
SNCAP37840 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.63□□□□□ -0.23
SNCAP37840 NTF6B-201ENST00000591913 560 ntBASIC13.63□□□□□ -0.23
SNCAP37840 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 AC011467.2-201ENST00000598425 242 ntBASIC13.63□□□□□ -0.23
SNCAP37840 Z69720.1-201ENST00000601483 472 ntBASIC13.63□□□□□ -0.23
SNCAP37840 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.63□□□□□ -0.23
SNCAP37840 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.63□□□□□ -0.23
SNCAP37840 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SNCAP37840 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.63□□□□□ -0.23
SNCAP37840 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SNCAP37840 FRMD8P1-201ENST00000440433 1524 ntBASIC13.63□□□□□ -0.23
SNCAP37840 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SNCAP37840 AL391256.1-201ENST00000443260 1855 ntBASIC13.63□□□□□ -0.23
SNCAP37840 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SNCAP37840 AP002414.2-201ENST00000591780 3365 ntBASIC13.63□□□□□ -0.23
SNCAP37840 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.63□□□□□ -0.23
SNCAP37840 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SNCAP37840 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SNCAP37840 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.63□□□□□ -0.23
SNCAP37840 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 AC132938.5-201ENST00000624980 1813 ntBASIC13.62□□□□□ -0.23
SNCAP37840 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 TP73-AS1-210ENST00000637775 1455 ntBASIC13.62□□□□□ -0.23
SNCAP37840 AC138035.3-201ENST00000622706 2791 ntBASIC13.62□□□□□ -0.23
SNCAP37840 OR2I1P-209ENST00000641730 5365 ntBASIC13.62□□□□□ -0.23
SNCAP37840 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 PCDHA3-202ENST00000532566 4594 ntBASIC13.62□□□□□ -0.23
SNCAP37840 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.62□□□□□ -0.23
SNCAP37840 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.62□□□□□ -0.23
SNCAP37840 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 TMPOP1-202ENST00000424642 1267 ntBASIC13.62□□□□□ -0.23
SNCAP37840 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 SIGLEC30P-201ENST00000455569 941 ntBASIC13.62□□□□□ -0.23
SNCAP37840 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.62□□□□□ -0.23
SNCAP37840 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 RN7SL850P-201ENST00000579959 291 ntBASIC13.62□□□□□ -0.23
SNCAP37840 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.62□□□□□ -0.23
SNCAP37840 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SNCAP37840 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.62□□□□□ -0.23
SNCAP37840 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 KRT18P1-202ENST00000452408 1331 ntBASIC13.62□□□□□ -0.23
SNCAP37840 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SNCAP37840 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SNCAP37840 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SNCAP37840 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.61□□□□□ -0.23
SNCAP37840 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SNCAP37840 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms