Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.75■□□□□ 0.59
COPB2P35606 COX5BP8-201ENST00000416911 349 ntBASIC18.75■□□□□ 0.59
COPB2P35606 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.75■□□□□ 0.59
COPB2P35606 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.75■□□□□ 0.59
COPB2P35606 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.75■□□□□ 0.59
COPB2P35606 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.75■□□□□ 0.59
COPB2P35606 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 TP53TG3HP-202ENST00000569755 579 ntBASIC18.75■□□□□ 0.59
COPB2P35606 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COPB2P35606 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 GPAA1P2-202ENST00000606848 1787 ntBASIC18.75■□□□□ 0.59
COPB2P35606 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COPB2P35606 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.75■□□□□ 0.59
COPB2P35606 AD000864.1-201ENST00000624076 2295 ntBASIC18.75■□□□□ 0.59
COPB2P35606 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPB2P35606 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COPB2P35606 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.74■□□□□ 0.59
COPB2P35606 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.74■□□□□ 0.59
COPB2P35606 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 AL391825.1-201ENST00000457671 1364 ntBASIC18.74■□□□□ 0.59
COPB2P35606 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COPB2P35606 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 DFFBP1-201ENST00000433250 979 ntBASIC18.74■□□□□ 0.59
COPB2P35606 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COPB2P35606 HLA-J-202ENST00000469281 1241 ntBASIC18.74■□□□□ 0.59
COPB2P35606 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.74■□□□□ 0.59
COPB2P35606 AC135586.1-201ENST00000539323 574 ntBASIC18.74■□□□□ 0.59
COPB2P35606 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.74■□□□□ 0.59
COPB2P35606 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.74■□□□□ 0.59
COPB2P35606 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
COPB2P35606 AC061975.2-201ENST00000581722 295 ntBASIC18.74■□□□□ 0.59
COPB2P35606 AL132655.2-201ENST00000596276 594 ntBASIC18.74■□□□□ 0.59
COPB2P35606 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.74■□□□□ 0.59
COPB2P35606 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.74■□□□□ 0.59
COPB2P35606 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.74■□□□□ 0.59
COPB2P35606 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.74■□□□□ 0.59
COPB2P35606 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
COPB2P35606 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPB2P35606 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.73■□□□□ 0.59
COPB2P35606 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COPB2P35606 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 SPDYE17-201ENST00000412399 783 ntBASIC18.73■□□□□ 0.59
COPB2P35606 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
COPB2P35606 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.73■□□□□ 0.59
COPB2P35606 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COPB2P35606 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.73■□□□□ 0.59
COPB2P35606 AC140912.1-201ENST00000577171 1054 ntBASIC18.73■□□□□ 0.59
COPB2P35606 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.73■□□□□ 0.59
COPB2P35606 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.73■□□□□ 0.59
COPB2P35606 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.73■□□□□ 0.59
COPB2P35606 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
COPB2P35606 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPB2P35606 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.73■□□□□ 0.59
COPB2P35606 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.73■□□□□ 0.59
COPB2P35606 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.73■□□□□ 0.59
COPB2P35606 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPB2P35606 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COPB2P35606 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.72■□□□□ 0.59
COPB2P35606 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COPB2P35606 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.72■□□□□ 0.59
COPB2P35606 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms