Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HTR1EP28566 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HTR1EP28566 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.83■□□□□ 0.12
HTR1EP28566 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 SNX33P1-201ENST00000592116 1762 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HTR1EP28566 AC097637.2-201ENST00000624096 1997 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HTR1EP28566 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HTR1EP28566 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HTR1EP28566 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.82■□□□□ 0.12
HTR1EP28566 AC004832.2-201ENST00000426397 482 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 AC007967.2-201ENST00000432613 625 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.82■□□□□ 0.12
HTR1EP28566 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.82■□□□□ 0.12
HTR1EP28566 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.82■□□□□ 0.12
HTR1EP28566 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 UNC93B6-202ENST00000528242 690 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.82■□□□□ 0.12
HTR1EP28566 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 AC025062.2-201ENST00000605477 670 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 AL139288.1-201ENST00000623748 933 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 AC004817.3-201ENST00000602957 2129 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HTR1EP28566 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.82■□□□□ 0.12
HTR1EP28566 AL671710.1-201ENST00000610245 2349 ntBASIC15.82■□□□□ 0.12
HTR1EP28566 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTR1EP28566 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.82■□□□□ 0.12
HTR1EP28566 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.81■□□□□ 0.12
HTR1EP28566 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HTR1EP28566 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HTR1EP28566 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 LINC00982-205ENST00000420957 435 ntBASIC15.81■□□□□ 0.12
HTR1EP28566 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTR1EP28566 DNAJB3-202ENST00000449667 1266 ntBASIC15.81■□□□□ 0.12
HTR1EP28566 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms