Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 AP005117.1-201ENST00000584346 1413 ntBASIC15.91■□□□□ 0.14
CAPN3P20807 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.91■□□□□ 0.14
CAPN3P20807 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CAPN3P20807 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CAPN3P20807 PCGF3-213ENST00000620529 1899 ntBASIC15.91■□□□□ 0.14
CAPN3P20807 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 GPAA1P2-202ENST00000606848 1787 ntBASIC15.9■□□□□ 0.14
CAPN3P20807 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN3P20807 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN3P20807 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
CAPN3P20807 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CAPN3P20807 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN3P20807 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 AL591684.3-201ENST00000605187 298 ntBASIC15.9■□□□□ 0.14
CAPN3P20807 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 REXO1L3P-201ENST00000622202 1288 ntBASIC15.9■□□□□ 0.14
CAPN3P20807 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 AL513477.1-201ENST00000602865 2407 ntBASIC15.9■□□□□ 0.14
CAPN3P20807 TSPY26P-202ENST00000565928 3884 ntBASIC15.9■□□□□ 0.14
CAPN3P20807 CDC14C-201ENST00000428251 1719 ntBASIC15.9■□□□□ 0.14
CAPN3P20807 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CAPN3P20807 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN3P20807 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.9■□□□□ 0.14
CAPN3P20807 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.9■□□□□ 0.14
CAPN3P20807 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.9■□□□□ 0.14
CAPN3P20807 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CAPN3P20807 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
CAPN3P20807 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.89■□□□□ 0.13
CAPN3P20807 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.89■□□□□ 0.13
CAPN3P20807 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CAPN3P20807 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN3P20807 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN3P20807 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 AC023824.1-201ENST00000562945 2975 ntBASIC15.89■□□□□ 0.13
CAPN3P20807 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN3P20807 AC112504.1-201ENST00000623415 1841 ntBASIC15.89■□□□□ 0.13
CAPN3P20807 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms