Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
VCLP18206 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 AL353732.1-201ENST00000569618 1459 ntBASIC16.62■□□□□ 0.25
VCLP18206 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VCLP18206 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VCLP18206 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.62■□□□□ 0.25
VCLP18206 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.62■□□□□ 0.25
VCLP18206 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
VCLP18206 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.62■□□□□ 0.25
VCLP18206 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 ACTL9-202ENST00000612068 1252 ntBASIC16.62■□□□□ 0.25
VCLP18206 AC023511.2-201ENST00000618803 211 ntBASIC16.62■□□□□ 0.25
VCLP18206 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VCLP18206 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.62■□□□□ 0.25
VCLP18206 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
VCLP18206 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.62■□□□□ 0.25
VCLP18206 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VCLP18206 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 AL662844.4-201ENST00000606367 2838 ntBASIC16.61■□□□□ 0.25
VCLP18206 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
VCLP18206 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.61■□□□□ 0.25
VCLP18206 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 AC024909.3-201ENST00000611513 2257 ntBASIC16.61■□□□□ 0.25
VCLP18206 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VCLP18206 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 HCG4-201ENST00000418983 998 ntBASIC16.61■□□□□ 0.25
VCLP18206 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
VCLP18206 KRT19P2-202ENST00000557173 1012 ntBASIC16.61■□□□□ 0.25
VCLP18206 PDPK2P-202ENST00000562415 1191 ntBASIC16.61■□□□□ 0.25
VCLP18206 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.61■□□□□ 0.25
VCLP18206 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.61■□□□□ 0.25
VCLP18206 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.61■□□□□ 0.25
VCLP18206 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
VCLP18206 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.61■□□□□ 0.25
VCLP18206 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VCLP18206 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VCLP18206 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
VCLP18206 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.61■□□□□ 0.25
VCLP18206 AC025580.3-201ENST00000617932 1424 ntBASIC16.61■□□□□ 0.25
VCLP18206 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.6■□□□□ 0.25
VCLP18206 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.6■□□□□ 0.25
VCLP18206 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VCLP18206 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
VCLP18206 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.6■□□□□ 0.25
VCLP18206 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VCLP18206 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.6■□□□□ 0.25
VCLP18206 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.6■□□□□ 0.25
VCLP18206 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VCLP18206 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
VCLP18206 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.6■□□□□ 0.25
VCLP18206 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.6■□□□□ 0.25
VCLP18206 AL031432.2-201ENST00000566714 459 ntBASIC16.6■□□□□ 0.25
VCLP18206 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.6■□□□□ 0.25
VCLP18206 AL928711.1-201ENST00000570165 459 ntBASIC16.6■□□□□ 0.25
VCLP18206 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms