Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
HMGA1P17096 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA1P17096 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.94■□□□□ 0.3
HMGA1P17096 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA1P17096 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.94■□□□□ 0.3
HMGA1P17096 AC025048.6-201ENST00000634326 1161 ntBASIC16.94■□□□□ 0.3
HMGA1P17096 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA1P17096 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGA1P17096 AL592424.1-201ENST00000563624 1536 ntBASIC16.94■□□□□ 0.3
HMGA1P17096 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HMGA1P17096 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGA1P17096 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGA1P17096 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HMGA1P17096 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMGA1P17096 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMGA1P17096 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMGA1P17096 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMGA1P17096 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HMGA1P17096 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 AC005034.1-201ENST00000426657 489 ntBASIC16.93■□□□□ 0.3
HMGA1P17096 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 AC114501.2-201ENST00000439631 535 ntBASIC16.93■□□□□ 0.3
HMGA1P17096 GNAQP1-201ENST00000444815 1067 ntBASIC16.93■□□□□ 0.3
HMGA1P17096 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGA1P17096 SPDYE18-201ENST00000510091 1050 ntBASIC16.93■□□□□ 0.3
HMGA1P17096 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGA1P17096 AC104794.3-201ENST00000566840 1248 ntBASIC16.93■□□□□ 0.3
HMGA1P17096 AL035252.4-201ENST00000624174 288 ntBASIC16.93■□□□□ 0.3
HMGA1P17096 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGA1P17096 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMGA1P17096 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGA1P17096 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMGA1P17096 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGA1P17096 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGA1P17096 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGA1P17096 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HMGA1P17096 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HMGA1P17096 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 AGGF1P2-201ENST00000426656 2106 ntBASIC16.92■□□□□ 0.3
HMGA1P17096 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGA1P17096 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.92■□□□□ 0.3
HMGA1P17096 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 API5-211ENST00000534695 560 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 CYP4F24P-201ENST00000586049 1580 ntBASIC16.92■□□□□ 0.3
HMGA1P17096 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 AC005052.1-201ENST00000625181 2492 ntBASIC16.92■□□□□ 0.3
HMGA1P17096 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.92■□□□□ 0.3
HMGA1P17096 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGA1P17096 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HMGA1P17096 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HMGA1P17096 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGA1P17096 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGA1P17096 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGA1P17096 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGA1P17096 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms