Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SCG2P13521 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.92■□□□□ 0.62
SCG2P13521 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG2P13521 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 AC093520.2-201ENST00000561830 333 ntBASIC18.92■□□□□ 0.62
SCG2P13521 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.92■□□□□ 0.62
SCG2P13521 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SCG2P13521 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.92■□□□□ 0.62
SCG2P13521 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SCG2P13521 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCG2P13521 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SCG2P13521 AL592424.1-201ENST00000563624 1536 ntBASIC18.91■□□□□ 0.62
SCG2P13521 AL589702.1-201ENST00000641229 1509 ntBASIC18.91■□□□□ 0.62
SCG2P13521 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.91■□□□□ 0.62
SCG2P13521 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.91■□□□□ 0.62
SCG2P13521 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.91■□□□□ 0.62
SCG2P13521 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.91■□□□□ 0.62
SCG2P13521 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.91■□□□□ 0.62
SCG2P13521 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SCG2P13521 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
SCG2P13521 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.91■□□□□ 0.62
SCG2P13521 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SCG2P13521 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCG2P13521 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.91■□□□□ 0.62
SCG2P13521 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SCG2P13521 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 UXT-AS1-201ENST00000590504 1525 ntBASIC18.9■□□□□ 0.62
SCG2P13521 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.9■□□□□ 0.62
SCG2P13521 MTHFR-217ENST00000641820 1569 ntBASIC18.9■□□□□ 0.62
SCG2P13521 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SCG2P13521 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 AL627223.1-201ENST00000416693 442 ntBASIC18.9■□□□□ 0.62
SCG2P13521 AC005237.2-201ENST00000434368 219 ntBASIC18.9■□□□□ 0.62
SCG2P13521 METTL21AP1-201ENST00000438852 635 ntBASIC18.9■□□□□ 0.62
SCG2P13521 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.9■□□□□ 0.62
SCG2P13521 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
SCG2P13521 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 AC004835.2-201ENST00000603762 682 ntBASIC18.9■□□□□ 0.62
SCG2P13521 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SCG2P13521 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SCG2P13521 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.9■□□□□ 0.62
SCG2P13521 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
SCG2P13521 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCG2P13521 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCG2P13521 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.89■□□□□ 0.62
SCG2P13521 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms