Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.31■□□□□ 0.2
COL6A2P12110 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.31■□□□□ 0.2
COL6A2P12110 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COL6A2P12110 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COL6A2P12110 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.31■□□□□ 0.2
COL6A2P12110 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.31■□□□□ 0.2
COL6A2P12110 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.31■□□□□ 0.2
COL6A2P12110 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.31■□□□□ 0.2
COL6A2P12110 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.31■□□□□ 0.2
COL6A2P12110 AC073648.2-201ENST00000510116 352 ntBASIC16.31■□□□□ 0.2
COL6A2P12110 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.31■□□□□ 0.2
COL6A2P12110 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.31■□□□□ 0.2
COL6A2P12110 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.31■□□□□ 0.2
COL6A2P12110 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.31■□□□□ 0.2
COL6A2P12110 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.31■□□□□ 0.2
COL6A2P12110 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.31■□□□□ 0.2
COL6A2P12110 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.31■□□□□ 0.2
COL6A2P12110 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL6A2P12110 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL6A2P12110 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
COL6A2P12110 MRPL20P1-201ENST00000400819 433 ntBASIC16.3■□□□□ 0.2
COL6A2P12110 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 RPS2P1-201ENST00000434010 821 ntBASIC16.3■□□□□ 0.2
COL6A2P12110 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.3■□□□□ 0.2
COL6A2P12110 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.3■□□□□ 0.2
COL6A2P12110 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL6A2P12110 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.3■□□□□ 0.2
COL6A2P12110 MIR4515-201ENST00000584082 81 ntBASIC16.3■□□□□ 0.2
COL6A2P12110 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
COL6A2P12110 AC021097.1-201ENST00000607902 574 ntBASIC16.3■□□□□ 0.2
COL6A2P12110 AC008735.5-201ENST00000623544 497 ntBASIC16.3■□□□□ 0.2
COL6A2P12110 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL6A2P12110 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COL6A2P12110 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.3■□□□□ 0.2
COL6A2P12110 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.3■□□□□ 0.2
COL6A2P12110 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.3■□□□□ 0.2
COL6A2P12110 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
COL6A2P12110 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL6A2P12110 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.3■□□□□ 0.2
COL6A2P12110 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
COL6A2P12110 U82695.1-201ENST00000635752 1889 ntBASIC16.29■□□□□ 0.2
COL6A2P12110 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.29■□□□□ 0.2
COL6A2P12110 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL6A2P12110 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL6A2P12110 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.29■□□□□ 0.2
COL6A2P12110 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.29■□□□□ 0.2
COL6A2P12110 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
COL6A2P12110 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL6A2P12110 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.29■□□□□ 0.2
COL6A2P12110 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms