Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
UBCP0CG48 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 AC092384.3-202ENST00000564646 2873 ntBASIC14.51□□□□□ -0.09
UBCP0CG48 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.51□□□□□ -0.09
UBCP0CG48 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.51□□□□□ -0.09
UBCP0CG48 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.51□□□□□ -0.09
UBCP0CG48 FGFR3P6-201ENST00000457012 610 ntBASIC14.51□□□□□ -0.09
UBCP0CG48 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.51□□□□□ -0.09
UBCP0CG48 SART3-203ENST00000546611 1184 ntBASIC14.51□□□□□ -0.09
UBCP0CG48 AC087641.1-201ENST00000557561 1021 ntBASIC14.51□□□□□ -0.09
UBCP0CG48 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.51□□□□□ -0.09
UBCP0CG48 AC005412.3-201ENST00000580309 715 ntBASIC14.51□□□□□ -0.09
UBCP0CG48 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
UBCP0CG48 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UBCP0CG48 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
UBCP0CG48 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UBCP0CG48 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.5□□□□□ -0.09
UBCP0CG48 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.5□□□□□ -0.09
UBCP0CG48 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.5□□□□□ -0.09
UBCP0CG48 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.5□□□□□ -0.09
UBCP0CG48 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.5□□□□□ -0.09
UBCP0CG48 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 HCG4-201ENST00000418983 998 ntBASIC14.5□□□□□ -0.09
UBCP0CG48 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.5□□□□□ -0.09
UBCP0CG48 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.5□□□□□ -0.09
UBCP0CG48 LAGE3P1-201ENST00000425356 484 ntBASIC14.5□□□□□ -0.09
UBCP0CG48 SLC25A6P2-201ENST00000497974 877 ntBASIC14.5□□□□□ -0.09
UBCP0CG48 KRT18P35-201ENST00000510488 1269 ntBASIC14.5□□□□□ -0.09
UBCP0CG48 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.5□□□□□ -0.09
UBCP0CG48 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 MIR3652-201ENST00000579335 131 ntBASIC14.5□□□□□ -0.09
UBCP0CG48 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UBCP0CG48 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.5□□□□□ -0.09
UBCP0CG48 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
UBCP0CG48 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBCP0CG48 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBCP0CG48 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.49□□□□□ -0.09
UBCP0CG48 SLC22A20-204ENST00000530038 1673 ntBASIC14.49□□□□□ -0.09
UBCP0CG48 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.49□□□□□ -0.09
UBCP0CG48 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.49□□□□□ -0.09
UBCP0CG48 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms