Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.71■□□□□ 0.75
CHGBP05060 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.71■□□□□ 0.75
CHGBP05060 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.71■□□□□ 0.75
CHGBP05060 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.71■□□□□ 0.75
CHGBP05060 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.71■□□□□ 0.75
CHGBP05060 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.71■□□□□ 0.75
CHGBP05060 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.71■□□□□ 0.75
CHGBP05060 RFPL4AP1-201ENST00000530883 850 ntBASIC19.71■□□□□ 0.75
CHGBP05060 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.71■□□□□ 0.75
CHGBP05060 MIR4453-201ENST00000584019 89 ntBASIC19.71■□□□□ 0.75
CHGBP05060 AL390955.2-201ENST00000603032 514 ntBASIC19.71■□□□□ 0.75
CHGBP05060 AP001059.3-201ENST00000619053 235 ntBASIC19.71■□□□□ 0.75
CHGBP05060 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.71■□□□□ 0.75
CHGBP05060 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.71■□□□□ 0.75
CHGBP05060 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.71■□□□□ 0.75
CHGBP05060 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.71■□□□□ 0.75
CHGBP05060 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CHGBP05060 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CHGBP05060 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.71■□□□□ 0.75
CHGBP05060 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHGBP05060 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHGBP05060 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHGBP05060 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CHGBP05060 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.7■□□□□ 0.74
CHGBP05060 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
CHGBP05060 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.7■□□□□ 0.74
CHGBP05060 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.7■□□□□ 0.74
CHGBP05060 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.7■□□□□ 0.74
CHGBP05060 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHGBP05060 DUX4L27-201ENST00000554796 1261 ntBASIC19.7■□□□□ 0.74
CHGBP05060 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.7■□□□□ 0.74
CHGBP05060 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.7■□□□□ 0.74
CHGBP05060 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.7■□□□□ 0.74
CHGBP05060 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHGBP05060 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CHGBP05060 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHGBP05060 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHGBP05060 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHGBP05060 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHGBP05060 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.7■□□□□ 0.74
CHGBP05060 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.69■□□□□ 0.74
CHGBP05060 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHGBP05060 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.69■□□□□ 0.74
CHGBP05060 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CHGBP05060 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.69■□□□□ 0.74
CHGBP05060 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.69■□□□□ 0.74
CHGBP05060 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CHGBP05060 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CHGBP05060 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHGBP05060 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.69■□□□□ 0.74
CHGBP05060 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHGBP05060 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.69■□□□□ 0.74
CHGBP05060 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHGBP05060 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHGBP05060 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CHGBP05060 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHGBP05060 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms