Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFAP04085 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFAP04085 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 LINC00304-203ENST00000565008 1864 ntBASIC15.46■□□□□ 0.07
PDGFAP04085 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PDGFAP04085 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 WASH6P-202ENST00000359512 1437 ntBASIC15.46■□□□□ 0.07
PDGFAP04085 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 CRB3P1-201ENST00000449338 276 ntBASIC15.46■□□□□ 0.07
PDGFAP04085 MEIS3P1-201ENST00000495167 958 ntBASIC15.46■□□□□ 0.07
PDGFAP04085 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.46■□□□□ 0.07
PDGFAP04085 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 AP000842.3-202ENST00000569238 1080 ntBASIC15.46■□□□□ 0.07
PDGFAP04085 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.46■□□□□ 0.07
PDGFAP04085 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.46■□□□□ 0.07
PDGFAP04085 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PDGFAP04085 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PDGFAP04085 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.46■□□□□ 0.07
PDGFAP04085 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PDGFAP04085 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PDGFAP04085 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFAP04085 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFAP04085 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFAP04085 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFAP04085 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFAP04085 PCDHB17P-201ENST00000539533 2393 ntBASIC15.46■□□□□ 0.06
PDGFAP04085 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFAP04085 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDGFAP04085 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFAP04085 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 MRPS18AP1-201ENST00000414458 589 ntBASIC15.45■□□□□ 0.06
PDGFAP04085 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.45■□□□□ 0.06
PDGFAP04085 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFAP04085 AC004890.2-204ENST00000481968 304 ntBASIC15.45■□□□□ 0.06
PDGFAP04085 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.45■□□□□ 0.06
PDGFAP04085 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 AC023824.1-201ENST00000562945 2975 ntBASIC15.45■□□□□ 0.06
PDGFAP04085 MIR4453-201ENST00000584019 89 ntBASIC15.45■□□□□ 0.06
PDGFAP04085 AC027307.2-201ENST00000591252 911 ntBASIC15.45■□□□□ 0.06
PDGFAP04085 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 AC244517.3-201ENST00000616254 1235 ntBASIC15.45■□□□□ 0.06
PDGFAP04085 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDGFAP04085 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 PP12613-201ENST00000424958 2230 ntBASIC15.45■□□□□ 0.06
PDGFAP04085 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFAP04085 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDGFAP04085 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
PDGFAP04085 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFAP04085 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFAP04085 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms