Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
APOA1P02647 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.76□□□□□ -0.05
APOA1P02647 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOA1P02647 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.75□□□□□ -0.05
APOA1P02647 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.75□□□□□ -0.05
APOA1P02647 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
APOA1P02647 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
APOA1P02647 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.75□□□□□ -0.05
APOA1P02647 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.75□□□□□ -0.05
APOA1P02647 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 AP000523.1-201ENST00000398242 1049 ntBASIC14.75□□□□□ -0.05
APOA1P02647 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.75□□□□□ -0.05
APOA1P02647 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.75□□□□□ -0.05
APOA1P02647 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.75□□□□□ -0.05
APOA1P02647 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
APOA1P02647 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.75□□□□□ -0.05
APOA1P02647 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.75□□□□□ -0.05
APOA1P02647 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.75□□□□□ -0.05
APOA1P02647 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
APOA1P02647 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOA1P02647 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.75□□□□□ -0.05
APOA1P02647 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.74□□□□□ -0.05
APOA1P02647 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.74□□□□□ -0.05
APOA1P02647 FITM1-202ENST00000559294 800 ntBASIC14.74□□□□□ -0.05
APOA1P02647 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
APOA1P02647 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOA1P02647 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
APOA1P02647 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOA1P02647 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA1P02647 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
APOA1P02647 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.73□□□□□ -0.05
APOA1P02647 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOA1P02647 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
APOA1P02647 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
APOA1P02647 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
APOA1P02647 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.73□□□□□ -0.05
APOA1P02647 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 AC006486.2-201ENST00000624246 2199 ntBASIC14.73□□□□□ -0.05
APOA1P02647 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
APOA1P02647 TSPY14P-201ENST00000303979 915 ntBASIC14.73□□□□□ -0.05
APOA1P02647 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.73□□□□□ -0.05
APOA1P02647 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOA1P02647 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
APOA1P02647 AC026396.1-201ENST00000419388 421 ntBASIC14.73□□□□□ -0.05
APOA1P02647 AC012618.2-201ENST00000428058 849 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms